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Mini Healthy Pumpkin Cheesecakes with almond flour crust and creamy pumpkin filling, topped with a sprinkle of cinnamon — a Low Fat Pumpkin Cheesecake that’s gluten-free, rich, and perfect for fall dessert lovers.

Healthy Pumpkin Cheesecake Recipe: Low-Fat, Flavor-Forward Dessert

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  • Author: Jennifer
  • Prep Time: 10 minutes
  • Cook Time: 12 minutes
  • Total Time: 6 hours 22 minutes
  • Yield: 12 mini cheesecake 1x
  • Category: Dessert

Description

Light, creamy, and bursting with cozy fall flavor — these Mini Healthy Pumpkin Cheesecakes are your new guilt-free dessert crush. Made with Greek yogurt, naturally sweetened, and baked on a buttery almond flour crust, they’re the perfect “treat yo’self” moment that doesn’t derail your healthy goals.


Ingredients

Scale

For the Crust:

  • 1 cup almond flour
  • ¼ cup lightly packed brown sugar
  • ½ teaspoon cinnamon
  • 4 tablespoons melted butter

For the Filling:

  • 8 ounces Neufchâtel cream cheese ( less fat)
  • ⅔ cup nonfat Greek yogurt
  • ½ cup pure pumpkin purée
  • 3 tablespoons maple syrup
  • 2 teaspoons vanilla extract
  • ¾ teaspoon cinnamon
  • ¼ teaspoon nutmeg
  • ¼ teaspoon ground ginger


Instructions

1. Bring everything to room temp first.
This is non-negotiable! Cold cream cheese equals lumpy filling — and nobody wants that. Let your ingredients warm up before mixing for a silky-smooth texture later.

2. Get your oven ready.
Preheat to 350°F (175°C) and line a 12-cup muffin pan with foil or silicone liners. (Skip paper liners — trust me, they’ll cling on for dear life.)

3. Make the crust.
In a mixing bowl, stir together the almond flour, brown sugar, cinnamon, and melted butter. You’re aiming for a crumbly, sand-like texture that holds its shape when pressed.

Spoon about 1½ tablespoons of the crust mixture into each muffin cup, pressing it down firmly so it forms a solid base. If you have any leftover crumbs, just divvy them up evenly between cups.

4. Bake the crusts.
Pop them into the oven for 11–12 minutes, until the edges are just starting to toast and smell like heaven. Pull them out and let them cool while you whip up the filling. (Pro tip: stick them in the fridge to cool faster if you’re impatient — no judgment.)

5. Whip the filling.
In a large bowl or stand mixer, combine the cream cheese, Greek yogurt, pumpkin puree, maple syrup, vanilla, and spices. Using the whisk attachment (or hand beaters), whip everything together on high speed for 5–6 minutes until the mixture is airy, smooth, and completely lump-free.

6. Fill those crusts.
Once the crusts are totally cool, spoon about 3 tablespoons of the pumpkin cheesecake filling into each muffin cup — they should be roughly ¾ full. Smooth the tops with a spoon or small spatula.

7. Chill to perfection.
No baking needed here! Slide the pan into the fridge and let the cheesecakes set for at least 6–8 hours, or even better, overnight. The longer they chill, the creamier they become.

 

8. Serve & enjoy!
Gently remove them from their liners, top with a sprinkle of cinnamon, a drizzle of maple syrup, or even a dollop of whipped cream if you’re feeling fancy.


Notes

  • Tips for the Best Pumpkin Cheesecakes
    • Use silicone liners for the easiest release and prettiest results.
    • Room temperature ingredients = smooth filling. Cold dairy is the enemy of creamy cheesecake.
    • Don’t rush the chill time. It’s worth the wait — promise.
    • Make ahead! These hold beautifully in the fridge for up to 5 days, or freeze for longer.

Nutrition

  • Serving Size: 1mini cheesecake
  • Calories: 168kcal
  • Sugar: 10g
  • Sodium: 128mg
  • Fat: 11g
  • Saturated Fat: 4g
  • Carbohydrates: 13g
  • Fiber: 1g
  • Protein: 5g
  • Cholesterol: 21mg